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https://hdl.handle.net/10316/108922
Title: | Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3(T)) | Authors: | Key, Trent A. Richmond, Dray P. Bowman, Kimberly S. Cho, Yong-Joon Chun, Jongsik Costa, Milton S. da Rainey, Fred A. Moe, William M. |
Keywords: | Chloroflexi; Dehalococcoidia; Reductive dechlorination; 1,2-dichloroethane; 1,2-dichloropropane; 1,2,3-trichloropropane | Issue Date: | 2016 | Publisher: | Springer Nature | metadata.degois.publication.title: | Standards in Genomic Sciences | metadata.degois.publication.volume: | 11 | metadata.degois.publication.issue: | 1 | Abstract: | Dehalogenimonas alkenigignens IP3-3(T) is a strictly anaerobic, mesophilic, Gram negative staining bacterium that grows by organohalide respiration, coupling the oxidation of H2 to the reductive dehalogenation of polychlorinated alkanes. Growth has not been observed with any non-polyhalogenated alkane electron acceptors. Here we describe the features of strain IP3-3(T) together with genome sequence information and its annotation. The 1,849,792 bp high-quality-draft genome contains 1936 predicted protein coding genes, 47 tRNA genes, a single large subunit rRNA (23S-5S) locus, and a single, orphan, small unit rRNA (16S) locus. The genome contains 29 predicted reductive dehalogenase genes, a large majority of which lack cognate genes encoding membrane anchoring proteins. | URI: | https://hdl.handle.net/10316/108922 | ISSN: | 1944-3277 | DOI: | 10.1186/s40793-016-0165-7 | Rights: | openAccess |
Appears in Collections: | FCTUC Ciências da Vida - Artigos em Revistas Internacionais |
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Genome-sequence-of-the-organohaliderespiring-Dehalogenimonas-alkenigignens-type-strain-IP33supTsupStandards-in-Genomic-Sciences.pdf | 2.48 MB | Adobe PDF | View/Open |
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